Undergraduate Intern
Published:
Algorithm track
Posts by Collection
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Ph.D. Student
Published:
Algorithm track & Bioinformatic track [Chinese nationals only due to regulations]
PostDoc
Published:
Bioinformatic track
Research Assistant/Associate
Published:
Algorithm track & Bioinformatic track
Visiting Scholar/Student
Published:
Algorithm track & Bioinformatic track
people
Changtai Hu
Published:
Chao Zhang
Published:
Junyi Ding
Published:
Qiyi Yang
Published:
Xin Jiang
Published:
Yuanyuan Zhao
Published:
Ziye Wang
Published:
Zuizhi Chen
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publications
CASTER: Direct species tree inference from whole-genome alignments
Published in Science, 2025
Tool: CASTER
Recommended citation: Chao Zhang, Rasmus Nielsen, Siavash Mirarab, "CASTER: Direct species tree inference from whole-genome alignments." Science. (2025).
Download Paper
ASTER: A Package for Large-scale Phylogenomic Reconstructions
Published in Molecular Biology and Evolution, 2025
Package: ASTER
Recommended citation: Chao Zhang, Rasmus Nielsen, Siavash Mirarab, "ASTER: A Package for Large-scale Phylogenomic Reconstructions." Molecular Biology and Evolution. (2025).
Download Paper
WASTER: Practical de novo phylogenomics from low-coverage short reads
Published in Molecular Biology and Evolution, 2026
Tool: WASTER
Recommended citation: Chao Zhang, Rasmus Nielsen, "WASTER: Practical de novo phylogenomics from low-coverage short reads." Molecular Biology and Evolution. (2026).
Download Paper
research
Research Interest: Software Development
Published:
Algorithm track
Research Interest: Phylogenetic Analysis
Published:
Bioinformatic track
teaching
Bioinformatics Algorithms in Evolutionary Biology
Course, Peking University, School of Life Sciences, 2026
Algorithm course for beginners
Computation and Artificial Intelligence in Biology
Course, Peking University, Center for Life Sciences, 2026
bioinformatics course for beginners
Molecular Evolution and Phylogenetics
Course, Peking University, School of Life Sciences, 2026
Advanced course for phylogenetic and evolutionary analysis
tools
CASTER
Published:
Direct species tree inference from whole-genome alignment
[Package] ASTER
Published:
Package: Accurate Species Tree EstimatoR
[Package] ASTER2
Published:
Faster & New functions & Comprehensive logging
D* statistic
Published:
Interspecific hybridization detection
WASTER
Published:
Practical de novo phylogenomics from low-coverage short reads